STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdonCell adhesion associated, oncogene regulated. (1122 aa)    
Predicted Functional Partners:
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.973
dhh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.971
LOC102297062
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.968
ihh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.968
ptch2
Patched 2.
    
 0.921
ptch1
Patched 1.
    
 0.921
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 0.903
LOC102295591
Growth arrest-specific 1b.
    
 0.898
ENSHBUP00000018808
Uncharacterized protein.
     
 0.868
gas1
Growth arrest-specific 1a.
     
 0.868
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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