Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GATA2 | LOC102292163 | ENSHBUP00000007445 | ENSHBUP00000017746 | GATA binding protein 2. | Eomesodermin homolog a. | 0.566 |
GATA2 | LOC102314015 | ENSHBUP00000007445 | ENSHBUP00000021572 | GATA binding protein 2. | POU domain protein. | 0.417 |
GATA2 | gata4 | ENSHBUP00000007445 | ENSHBUP00000010000 | GATA binding protein 2. | GATA binding protein 4. | 0.551 |
GATA2 | tbr1 | ENSHBUP00000007445 | ENSHBUP00000003319 | GATA binding protein 2. | T-box brain transcription factor 1b. | 0.566 |
GATA2 | tbxt | ENSHBUP00000007445 | ENSHBUP00000008813 | GATA binding protein 2. | T-box transcription factor Tb. | 0.630 |
LOC102292163 | GATA2 | ENSHBUP00000017746 | ENSHBUP00000007445 | Eomesodermin homolog a. | GATA binding protein 2. | 0.566 |
LOC102292163 | LOC102314015 | ENSHBUP00000017746 | ENSHBUP00000021572 | Eomesodermin homolog a. | POU domain protein. | 0.556 |
LOC102292163 | gata3 | ENSHBUP00000017746 | ENSHBUP00000023967 | Eomesodermin homolog a. | GATA binding protein 3. | 0.566 |
LOC102292163 | gata4 | ENSHBUP00000017746 | ENSHBUP00000010000 | Eomesodermin homolog a. | GATA binding protein 4. | 0.526 |
LOC102292163 | mixl1 | ENSHBUP00000017746 | ENSHBUP00000008759 | Eomesodermin homolog a. | Mix paired-like homeobox. | 0.609 |
LOC102292163 | snai2 | ENSHBUP00000017746 | ENSHBUP00000025652 | Eomesodermin homolog a. | Snail family zinc finger 2. | 0.625 |
LOC102292163 | tbxt | ENSHBUP00000017746 | ENSHBUP00000008813 | Eomesodermin homolog a. | T-box transcription factor Tb. | 0.639 |
LOC102300318 | tbxt | ENSHBUP00000008919 | ENSHBUP00000008813 | Notochord homeobox. | T-box transcription factor Tb. | 0.659 |
LOC102314015 | GATA2 | ENSHBUP00000021572 | ENSHBUP00000007445 | POU domain protein. | GATA binding protein 2. | 0.417 |
LOC102314015 | LOC102292163 | ENSHBUP00000021572 | ENSHBUP00000017746 | POU domain protein. | Eomesodermin homolog a. | 0.556 |
LOC102314015 | bmp4 | ENSHBUP00000021572 | ENSHBUP00000025506 | POU domain protein. | Bone morphogenetic protein 4. | 0.419 |
LOC102314015 | gata3 | ENSHBUP00000021572 | ENSHBUP00000023967 | POU domain protein. | GATA binding protein 3. | 0.458 |
LOC102314015 | gata4 | ENSHBUP00000021572 | ENSHBUP00000010000 | POU domain protein. | GATA binding protein 4. | 0.626 |
LOC102314015 | mixl1 | ENSHBUP00000021572 | ENSHBUP00000008759 | POU domain protein. | Mix paired-like homeobox. | 0.432 |
LOC102314015 | tbr1 | ENSHBUP00000021572 | ENSHBUP00000003319 | POU domain protein. | T-box brain transcription factor 1b. | 0.525 |
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