Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102289696 | LOC102293397 | ENSHBUP00000000837 | ENSHBUP00000013062 | Macrophage stimulating 1 receptor a. | Toll-like receptor 18. | 0.544 |
LOC102289696 | LOC102300034 | ENSHBUP00000000837 | ENSHBUP00000031968 | Macrophage stimulating 1 receptor a. | TIR domain-containing protein; Belongs to the Toll-like receptor family. | 0.544 |
LOC102289696 | LOC102301752 | ENSHBUP00000000837 | ENSHBUP00000017471 | Macrophage stimulating 1 receptor a. | TIR domain-containing protein. | 0.544 |
LOC102289696 | TLR2 | ENSHBUP00000000837 | ENSHBUP00000033215 | Macrophage stimulating 1 receptor a. | Toll like receptor 2; Belongs to the Toll-like receptor family. | 0.544 |
LOC102289696 | irak1 | ENSHBUP00000000837 | ENSHBUP00000018637 | Macrophage stimulating 1 receptor a. | Interleukin-1 receptor-associated kinase 1. | 0.407 |
LOC102289696 | irak4 | ENSHBUP00000000837 | ENSHBUP00000030789 | Macrophage stimulating 1 receptor a. | Interleukin-1 receptor-associated kinase 4. | 0.407 |
LOC102289696 | myd88 | ENSHBUP00000000837 | ENSHBUP00000030883 | Macrophage stimulating 1 receptor a. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.415 |
LOC102289696 | tirap | ENSHBUP00000000837 | ENSHBUP00000003481 | Macrophage stimulating 1 receptor a. | Toll-interleukin 1 receptor (TIR) domain containing adaptor protein. | 0.499 |
LOC102289696 | tollip | ENSHBUP00000000837 | ENSHBUP00000011181 | Macrophage stimulating 1 receptor a. | Toll interacting protein. | 0.840 |
LOC102289696 | traf6 | ENSHBUP00000000837 | ENSHBUP00000006634 | Macrophage stimulating 1 receptor a. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.415 |
LOC102293397 | LOC102289696 | ENSHBUP00000013062 | ENSHBUP00000000837 | Toll-like receptor 18. | Macrophage stimulating 1 receptor a. | 0.544 |
LOC102293397 | irak1 | ENSHBUP00000013062 | ENSHBUP00000018637 | Toll-like receptor 18. | Interleukin-1 receptor-associated kinase 1. | 0.457 |
LOC102293397 | irak4 | ENSHBUP00000013062 | ENSHBUP00000030789 | Toll-like receptor 18. | Interleukin-1 receptor-associated kinase 4. | 0.517 |
LOC102293397 | myd88 | ENSHBUP00000013062 | ENSHBUP00000030883 | Toll-like receptor 18. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.931 |
LOC102293397 | tirap | ENSHBUP00000013062 | ENSHBUP00000003481 | Toll-like receptor 18. | Toll-interleukin 1 receptor (TIR) domain containing adaptor protein. | 0.908 |
LOC102293397 | tollip | ENSHBUP00000013062 | ENSHBUP00000011181 | Toll-like receptor 18. | Toll interacting protein. | 0.878 |
LOC102293397 | traf6 | ENSHBUP00000013062 | ENSHBUP00000006634 | Toll-like receptor 18. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.546 |
LOC102300034 | LOC102289696 | ENSHBUP00000031968 | ENSHBUP00000000837 | TIR domain-containing protein; Belongs to the Toll-like receptor family. | Macrophage stimulating 1 receptor a. | 0.544 |
LOC102300034 | irak1 | ENSHBUP00000031968 | ENSHBUP00000018637 | TIR domain-containing protein; Belongs to the Toll-like receptor family. | Interleukin-1 receptor-associated kinase 1. | 0.457 |
LOC102300034 | irak4 | ENSHBUP00000031968 | ENSHBUP00000030789 | TIR domain-containing protein; Belongs to the Toll-like receptor family. | Interleukin-1 receptor-associated kinase 4. | 0.517 |
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