Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102294241 | LOC102308639 | ENSHBUP00000002541 | ENSHBUP00000009518 | Si:ch1073-174d20.2. | Ubiquinol-cytochrome c reductase core protein 1. | 0.743 |
LOC102294241 | PHB2 | ENSHBUP00000002541 | ENSHBUP00000011298 | Si:ch1073-174d20.2. | Prohibitin. | 0.884 |
LOC102294241 | micu1 | ENSHBUP00000002541 | ENSHBUP00000008967 | Si:ch1073-174d20.2. | Mitochondrial calcium uptake 1. | 0.732 |
LOC102294241 | phb | ENSHBUP00000002541 | ENSHBUP00000035440 | Si:ch1073-174d20.2. | Prohibitin. | 0.927 |
LOC102294241 | pmpcb | ENSHBUP00000002541 | ENSHBUP00000015016 | Si:ch1073-174d20.2. | Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family. | 0.743 |
LOC102294241 | spg7 | ENSHBUP00000002541 | ENSHBUP00000021393 | Si:ch1073-174d20.2. | SPG7 matrix AAA peptidase subunit, paraplegin. | 0.786 |
LOC102294241 | tufm | ENSHBUP00000002541 | ENSHBUP00000032609 | Si:ch1073-174d20.2. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.621 |
LOC102305021 | LOC102308639 | ENSHBUP00000014106 | ENSHBUP00000009518 | AAA domain-containing protein. | Ubiquinol-cytochrome c reductase core protein 1. | 0.743 |
LOC102305021 | PHB2 | ENSHBUP00000014106 | ENSHBUP00000011298 | AAA domain-containing protein. | Prohibitin. | 0.884 |
LOC102305021 | micu1 | ENSHBUP00000014106 | ENSHBUP00000008967 | AAA domain-containing protein. | Mitochondrial calcium uptake 1. | 0.732 |
LOC102305021 | phb | ENSHBUP00000014106 | ENSHBUP00000035440 | AAA domain-containing protein. | Prohibitin. | 0.927 |
LOC102305021 | pmpcb | ENSHBUP00000014106 | ENSHBUP00000015016 | AAA domain-containing protein. | Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family. | 0.743 |
LOC102305021 | spg7 | ENSHBUP00000014106 | ENSHBUP00000021393 | AAA domain-containing protein. | SPG7 matrix AAA peptidase subunit, paraplegin. | 0.787 |
LOC102305021 | tufm | ENSHBUP00000014106 | ENSHBUP00000032609 | AAA domain-containing protein. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.624 |
LOC102308639 | LOC102294241 | ENSHBUP00000009518 | ENSHBUP00000002541 | Ubiquinol-cytochrome c reductase core protein 1. | Si:ch1073-174d20.2. | 0.743 |
LOC102308639 | LOC102305021 | ENSHBUP00000009518 | ENSHBUP00000014106 | Ubiquinol-cytochrome c reductase core protein 1. | AAA domain-containing protein. | 0.743 |
LOC102308639 | PHB2 | ENSHBUP00000009518 | ENSHBUP00000011298 | Ubiquinol-cytochrome c reductase core protein 1. | Prohibitin. | 0.921 |
LOC102308639 | afg3l2 | ENSHBUP00000009518 | ENSHBUP00000008168 | Ubiquinol-cytochrome c reductase core protein 1. | AFG3-like AAA ATPase 2. | 0.743 |
LOC102308639 | phb | ENSHBUP00000009518 | ENSHBUP00000035440 | Ubiquinol-cytochrome c reductase core protein 1. | Prohibitin. | 0.771 |
LOC102308639 | spg7 | ENSHBUP00000009518 | ENSHBUP00000021393 | Ubiquinol-cytochrome c reductase core protein 1. | SPG7 matrix AAA peptidase subunit, paraplegin. | 0.801 |
page 1 of 5