STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102313915Uncharacterized protein. (174 aa)    
Predicted Functional Partners:
fancc
FA complementation group C.
    
  0.675
ENSHBUP00000008606
FA complementation group G.
    
  0.675
fancf
FA complementation group F.
    
  0.675
fancl
FA complementation group L.
    
  0.675
fance
FA complementation group E.
    
  0.603
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.603
LOC102303702
NTF2 domain-containing protein.
    
  0.587
fanca
Fanconi_A_N domain-containing protein.
    
  0.587
mrpl1
Mitochondrial ribosomal protein L1.
    
  0.587
nutf2
Nuclear transport factor 2.
    
  0.587
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.