STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asap1ArfGAP with SH3 domain, ankyrin repeat and PH domain 1b. (897 aa)    
Predicted Functional Partners:
LOC102293439
Uncharacterized protein.
 
      0.897
ENSHBUP00000018199
ADP-ribosylation factor 6b.
    
 0.832
arfgap3
ADP-ribosylation factor GTPase activating protein 3.
    
0.712
exoc7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.703
ARAP1
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1.
   
0.695
LOC102307379
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
   
0.694
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
 
 0.666
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
   
 
 0.666
ENSHBUP00000005863
Uncharacterized protein.
  
 
 
0.660
rab11fip3
RAB11 family interacting protein 3 (class II).
    
 0.655
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.