Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSHBUP00000006420 | abraxas2 | ENSHBUP00000006420 | ENSHBUP00000015087 | Uncharacterized protein. | Abraxas 2, BRISC complex subunit. | 0.599 |
ENSHBUP00000006420 | babam2 | ENSHBUP00000006420 | ENSHBUP00000011038 | Uncharacterized protein. | BRISC and BRCA1 A complex member 2. | 0.663 |
ENSHBUP00000011390 | LOC102307393 | ENSHBUP00000011390 | ENSHBUP00000016571 | BRCA1/BRCA2-containing complex, subunit 3. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.797 |
ENSHBUP00000011390 | SHMT2 | ENSHBUP00000011390 | ENSHBUP00000009432 | BRCA1/BRCA2-containing complex, subunit 3. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.797 |
ENSHBUP00000011390 | abraxas2 | ENSHBUP00000011390 | ENSHBUP00000015087 | BRCA1/BRCA2-containing complex, subunit 3. | Abraxas 2, BRISC complex subunit. | 0.992 |
ENSHBUP00000011390 | babam1 | ENSHBUP00000011390 | ENSHBUP00000003491 | BRCA1/BRCA2-containing complex, subunit 3. | BRISC and BRCA1 A complex member 1. | 0.999 |
ENSHBUP00000011390 | babam2 | ENSHBUP00000011390 | ENSHBUP00000011038 | BRCA1/BRCA2-containing complex, subunit 3. | BRISC and BRCA1 A complex member 2. | 0.998 |
ENSHBUP00000011390 | brca1 | ENSHBUP00000011390 | ENSHBUP00000003104 | BRCA1/BRCA2-containing complex, subunit 3. | Uncharacterized protein. | 0.975 |
ENSHBUP00000011390 | shmt1 | ENSHBUP00000011390 | ENSHBUP00000029290 | BRCA1/BRCA2-containing complex, subunit 3. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.797 |
ENSHBUP00000011390 | shmt2 | ENSHBUP00000011390 | ENSHBUP00000026476 | BRCA1/BRCA2-containing complex, subunit 3. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.797 |
LOC102307393 | ENSHBUP00000011390 | ENSHBUP00000016571 | ENSHBUP00000011390 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | BRCA1/BRCA2-containing complex, subunit 3. | 0.797 |
LOC102307393 | SHMT2 | ENSHBUP00000016571 | ENSHBUP00000009432 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.802 |
LOC102307393 | abraxas2 | ENSHBUP00000016571 | ENSHBUP00000015087 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Abraxas 2, BRISC complex subunit. | 0.781 |
LOC102307393 | ak9 | ENSHBUP00000016571 | ENSHBUP00000026887 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Adenylate kinase 9. | 0.493 |
LOC102307393 | babam1 | ENSHBUP00000016571 | ENSHBUP00000003491 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | BRISC and BRCA1 A complex member 1. | 0.697 |
LOC102307393 | babam2 | ENSHBUP00000016571 | ENSHBUP00000011038 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | BRISC and BRCA1 A complex member 2. | 0.770 |
SHMT2 | ENSHBUP00000011390 | ENSHBUP00000009432 | ENSHBUP00000011390 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | BRCA1/BRCA2-containing complex, subunit 3. | 0.797 |
SHMT2 | LOC102307393 | ENSHBUP00000009432 | ENSHBUP00000016571 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.802 |
SHMT2 | abraxas2 | ENSHBUP00000009432 | ENSHBUP00000015087 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Abraxas 2, BRISC complex subunit. | 0.781 |
SHMT2 | ak9 | ENSHBUP00000009432 | ENSHBUP00000026887 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Adenylate kinase 9. | 0.493 |
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