STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102299663Uncharacterized protein. (202 aa)    
Predicted Functional Partners:
LOC102310541
Vitronectin b.
    
 
 0.718
vtn
Vitronectin a.
    
 
 0.718
hgfac
HGF activator.
    
 0.585
habp2
Uncharacterized protein.
    
 0.576
plat
Plasminogen activator, tissue.
   
  0.452
ENSHBUP00000003396
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
  0.445
ENSHBUP00000003416
Peptidase S1 domain-containing protein.
   
  0.445
TMPRSS6
Transmembrane serine protease 6; Belongs to the peptidase S1 family.
   
  0.445
mst1
Macrophage stimulating 1; Belongs to the peptidase S1 family. Plasminogen subfamily.
    
 0.438
hgf
Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily.
    
 0.438
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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