STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102307506Orthodenticle homeobox 1. (332 aa)    
Predicted Functional Partners:
foxa2
Forkhead box A2.
   
 
 0.546
tbx20
T-box transcription factor 20.
      
 0.478
hoxd10
Homeobox D10a.
      
 0.478
ednrb
Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.
      
 0.445
LOC102301944
Paired box 10.
    
0.435
LOC102298771
Uncharacterized protein.
    
0.435
LOC102296763
Paired box 7a.
    
0.435
ENSHBUP00000015025
Paired box 6b.
    
0.435
LOC102303739
Paired box 3a.
    
0.435
pax3
Paired box 3b.
    
0.435
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.