Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cdc40 | cdc5l | ENSHBUP00000007974 | ENSHBUP00000031378 | Cell division cycle 40 homolog (S. cerevisiae). | CDC5 cell division cycle 5-like (S. pombe). | 0.995 |
cdc40 | ddx23 | ENSHBUP00000007974 | ENSHBUP00000010342 | Cell division cycle 40 homolog (S. cerevisiae). | DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. | 0.800 |
cdc40 | eftud2 | ENSHBUP00000007974 | ENSHBUP00000021109 | Cell division cycle 40 homolog (S. cerevisiae). | Elongation factor Tu GTP binding domain containing 2. | 0.994 |
cdc40 | prpf19 | ENSHBUP00000007974 | ENSHBUP00000026021 | Cell division cycle 40 homolog (S. cerevisiae). | Pre-mRNA processing factor 19. | 0.991 |
cdc40 | prpf6 | ENSHBUP00000007974 | ENSHBUP00000023564 | Cell division cycle 40 homolog (S. cerevisiae). | PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). | 0.689 |
cdc40 | prpf8 | ENSHBUP00000007974 | ENSHBUP00000014199 | Cell division cycle 40 homolog (S. cerevisiae). | Pre-mRNA processing factor 8. | 0.993 |
cdc40 | snrnp40 | ENSHBUP00000007974 | ENSHBUP00000016689 | Cell division cycle 40 homolog (S. cerevisiae). | Small nuclear ribonucleoprotein 40 (U5). | 0.988 |
cdc40 | snrpd2 | ENSHBUP00000007974 | ENSHBUP00000023357 | Cell division cycle 40 homolog (S. cerevisiae). | Small nuclear ribonucleoprotein Sm D2. | 0.973 |
cdc40 | snrpe | ENSHBUP00000007974 | ENSHBUP00000024583 | Cell division cycle 40 homolog (S. cerevisiae). | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.970 |
cdc40 | txnl4a | ENSHBUP00000007974 | ENSHBUP00000032655 | Cell division cycle 40 homolog (S. cerevisiae). | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | 0.669 |
cdc5l | cdc40 | ENSHBUP00000031378 | ENSHBUP00000007974 | CDC5 cell division cycle 5-like (S. pombe). | Cell division cycle 40 homolog (S. cerevisiae). | 0.995 |
cdc5l | ddx23 | ENSHBUP00000031378 | ENSHBUP00000010342 | CDC5 cell division cycle 5-like (S. pombe). | DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. | 0.770 |
cdc5l | eftud2 | ENSHBUP00000031378 | ENSHBUP00000021109 | CDC5 cell division cycle 5-like (S. pombe). | Elongation factor Tu GTP binding domain containing 2. | 0.995 |
cdc5l | prpf19 | ENSHBUP00000031378 | ENSHBUP00000026021 | CDC5 cell division cycle 5-like (S. pombe). | Pre-mRNA processing factor 19. | 0.999 |
cdc5l | prpf6 | ENSHBUP00000031378 | ENSHBUP00000023564 | CDC5 cell division cycle 5-like (S. pombe). | PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). | 0.690 |
cdc5l | prpf8 | ENSHBUP00000031378 | ENSHBUP00000014199 | CDC5 cell division cycle 5-like (S. pombe). | Pre-mRNA processing factor 8. | 0.994 |
cdc5l | snrnp40 | ENSHBUP00000031378 | ENSHBUP00000016689 | CDC5 cell division cycle 5-like (S. pombe). | Small nuclear ribonucleoprotein 40 (U5). | 0.987 |
cdc5l | snrpd2 | ENSHBUP00000031378 | ENSHBUP00000023357 | CDC5 cell division cycle 5-like (S. pombe). | Small nuclear ribonucleoprotein Sm D2. | 0.989 |
cdc5l | snrpe | ENSHBUP00000031378 | ENSHBUP00000024583 | CDC5 cell division cycle 5-like (S. pombe). | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.988 |
ddx23 | cdc40 | ENSHBUP00000010342 | ENSHBUP00000007974 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. | Cell division cycle 40 homolog (S. cerevisiae). | 0.800 |
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