STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102301172Solute carrier family 7 member 10a. (497 aa)    
Predicted Functional Partners:
slc3a2
Solute carrier family 3 member 2a.
  
 0.872
LOC102296503
Solute carrier family 3 member 2b.
  
 0.872
slc3a1
Solute carrier family 3 member 1.
  
 0.780
alkbh2
AlkB homolog 2, alpha-ketoglutarate-dependent dioxygenase.
  
 0.726
alkbh3
AlkB homolog 3, alpha-ketoglutarate-dependent dioxygenase.
  
 0.726
kiaa0513
Zgc:91860.
  
 0.726
LOC102307524
Alpha-amylase.
  
 0.583
LOC102307203
Alpha-amylase.
  
 0.583
LOC102303673
AA_permease_C domain-containing protein.
  
 
 0.567
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.565
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.