STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHBUP00000017559PDZ domain-containing protein. (195 aa)    
Predicted Functional Partners:
ENSHBUP00000006436
Ig-like domain-containing protein.
    
 0.863
frmd1
FERM domain containing 1.
    
 0.716
frmd6
FERM domain containing 6.
    
 0.716
gak
Cyclin G associated kinase.
    
 0.643
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
    
 0.639
LOC102313948
Rap guanine nucleotide exchange factor (GEF) 6.
    
 0.639
sav1
Salvador family WW domain containing protein 1.
    
 0.608
uck1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.603
uck2
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.603
LOC102308715
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.603
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.