Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102298971 | LOC102309363 | ENSHBUP00000006543 | ENSHBUP00000020248 | Aminoadipate-semialdehyde synthase. | Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.422 |
LOC102309363 | LOC102298971 | ENSHBUP00000020248 | ENSHBUP00000006543 | Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. | Aminoadipate-semialdehyde synthase. | 0.422 |
LOC102309363 | WDR25 | ENSHBUP00000020248 | ENSHBUP00000035566 | Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. | WD repeat domain 25. | 0.457 |
LOC102309363 | mrpl57 | ENSHBUP00000020248 | ENSHBUP00000033520 | Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. | Mitochondrial ribosomal protein L57. | 0.408 |
WDR25 | LOC102309363 | ENSHBUP00000035566 | ENSHBUP00000020248 | WD repeat domain 25. | Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.457 |
mrpl57 | LOC102309363 | ENSHBUP00000033520 | ENSHBUP00000020248 | Mitochondrial ribosomal protein L57. | Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.408 |