ENSHBUP00000021420 protein (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSHBUP00000021420

annotation not available (111 aa)

Predicted Functional Partners:

ENSHBUP00000006420

0.717

LOC102297542

0.704

ENSHBUP00000005892

0.613

rptor

0.544

ENSHBUP00000009680

0.537

LOC102294291

0.532

c1qtnf7

0.531

LOC102314538

0.525

det1

0.524

mlst8

0.524

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000005892	ENSHBUP00000009680	ENSHBUP00000005892	ENSHBUP00000009680	TROVE domain-containing protein.	C1q domain-containing protein.	0.613
ENSHBUP00000005892	ENSHBUP00000021420	ENSHBUP00000005892	ENSHBUP00000021420	TROVE domain-containing protein.	annotation not available	0.613
ENSHBUP00000005892	LOC102294291	ENSHBUP00000005892	ENSHBUP00000032319	TROVE domain-containing protein.	C1q and TNF related 9.	0.613
ENSHBUP00000005892	LOC102314538	ENSHBUP00000005892	ENSHBUP00000001130	TROVE domain-containing protein.	C1q and TNF related 2.	0.613
ENSHBUP00000005892	c1qtnf7	ENSHBUP00000005892	ENSHBUP00000020869	TROVE domain-containing protein.	C1q and TNF related 7.	0.613
ENSHBUP00000006420	ENSHBUP00000009680	ENSHBUP00000006420	ENSHBUP00000009680	Uncharacterized protein.	C1q domain-containing protein.	0.717
ENSHBUP00000006420	ENSHBUP00000021420	ENSHBUP00000006420	ENSHBUP00000021420	Uncharacterized protein.	annotation not available	0.717
ENSHBUP00000006420	LOC102294291	ENSHBUP00000006420	ENSHBUP00000032319	Uncharacterized protein.	C1q and TNF related 9.	0.717
ENSHBUP00000006420	LOC102297542	ENSHBUP00000006420	ENSHBUP00000021529	Uncharacterized protein.	C1q domain-containing protein.	0.449
ENSHBUP00000006420	LOC102314538	ENSHBUP00000006420	ENSHBUP00000001130	Uncharacterized protein.	C1q and TNF related 2.	0.717
ENSHBUP00000006420	c1qtnf7	ENSHBUP00000006420	ENSHBUP00000020869	Uncharacterized protein.	C1q and TNF related 7.	0.717
ENSHBUP00000009680	ENSHBUP00000005892	ENSHBUP00000009680	ENSHBUP00000005892	C1q domain-containing protein.	TROVE domain-containing protein.	0.613
ENSHBUP00000009680	ENSHBUP00000006420	ENSHBUP00000009680	ENSHBUP00000006420	C1q domain-containing protein.	Uncharacterized protein.	0.717
ENSHBUP00000009680	ENSHBUP00000021420	ENSHBUP00000009680	ENSHBUP00000021420	C1q domain-containing protein.	annotation not available	0.537
ENSHBUP00000009680	LOC102297542	ENSHBUP00000009680	ENSHBUP00000021529	C1q domain-containing protein.	C1q domain-containing protein.	0.649
ENSHBUP00000009680	det1	ENSHBUP00000009680	ENSHBUP00000008698	C1q domain-containing protein.	DET1 partner of COP1 E3 ubiquitin ligase.	0.524
ENSHBUP00000009680	mlst8	ENSHBUP00000009680	ENSHBUP00000018380	C1q domain-containing protein.	MTOR associated protein, LST8 homolog (S. cerevisiae).	0.524
ENSHBUP00000009680	rptor	ENSHBUP00000009680	ENSHBUP00000000346	C1q domain-containing protein.	Regulatory associated protein of MTOR, complex 1.	0.544
ENSHBUP00000021420	ENSHBUP00000005892	ENSHBUP00000021420	ENSHBUP00000005892	annotation not available	TROVE domain-containing protein.	0.613
ENSHBUP00000021420	ENSHBUP00000006420	ENSHBUP00000021420	ENSHBUP00000006420	annotation not available	Uncharacterized protein.	0.717