STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102291059Rho GTPase activating protein 1. (359 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.976
LOC102311613
Cell division cycle 42.
    
 0.976
LOC102294469
Uncharacterized protein.
    
 0.877
LOC102288700
Uncharacterized protein.
    
 0.877
LOC102307526
Uncharacterized protein.
    
 0.877
LOC102314603
Uncharacterized protein.
    
 0.877
LOC102300445
Uncharacterized protein.
    
 0.865
LOC102311006
Uncharacterized protein.
    
 0.865
LOC102290877
Ras homolog family member Cb.
    
 0.865
RHOB
Ras homolog family member B.
    
 0.865
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.