STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106632538SH3 domain-containing protein. (196 aa)    
Predicted Functional Partners:
ENSHBUP00000028611
Uncharacterized protein.
 
    
0.835
zyx
Uncharacterized protein.
    
 
 0.497
actn1
Actinin, alpha 1.
   
 0.489
ACTN4
Actinin alpha 4.
   
 0.489
LOC102301477
Actinin, alpha 2b.
   
 0.489
actn3
Actinin alpha 3b.
   
 0.489
ENSHBUP00000012298
Uncharacterized protein.
   
 0.482
tmod1
Tropomodulin 1.
   
 0.469
tmod4
Tropomodulin 4 (muscle).
   
 0.469
LOC102314562
Tropomodulin 2.
   
 0.458
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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