Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102304338 | bysl | ENSHBUP00000004178 | ENSHBUP00000022570 | PWP2 small subunit processome component. | Bystin-like. | 0.999 |
LOC102304338 | ltv1 | ENSHBUP00000004178 | ENSHBUP00000005521 | PWP2 small subunit processome component. | LTV1 ribosome biogenesis factor. | 0.846 |
LOC102304338 | nat10 | ENSHBUP00000004178 | ENSHBUP00000002504 | PWP2 small subunit processome component. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.999 |
LOC102304338 | noc4l | ENSHBUP00000004178 | ENSHBUP00000000153 | PWP2 small subunit processome component. | Nucleolar complex associated 4 homolog. | 0.998 |
LOC102304338 | nol6 | ENSHBUP00000004178 | ENSHBUP00000008542 | PWP2 small subunit processome component. | Nucleolar protein 6. | 0.999 |
LOC102304338 | rps7 | ENSHBUP00000004178 | ENSHBUP00000003449 | PWP2 small subunit processome component. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.982 |
LOC102304338 | rrp9 | ENSHBUP00000004178 | ENSHBUP00000000698 | PWP2 small subunit processome component. | Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. | 0.999 |
LOC102304338 | wdr3 | ENSHBUP00000004178 | ENSHBUP00000003066 | PWP2 small subunit processome component. | WD repeat domain 3. | 0.999 |
LOC102304338 | wdr36 | ENSHBUP00000004178 | ENSHBUP00000008962 | PWP2 small subunit processome component. | WD repeat domain 36. | 0.999 |
LOC102304338 | wdr43 | ENSHBUP00000004178 | ENSHBUP00000010055 | PWP2 small subunit processome component. | WD repeat domain 43. | 0.999 |
bysl | LOC102304338 | ENSHBUP00000022570 | ENSHBUP00000004178 | Bystin-like. | PWP2 small subunit processome component. | 0.999 |
bysl | ltv1 | ENSHBUP00000022570 | ENSHBUP00000005521 | Bystin-like. | LTV1 ribosome biogenesis factor. | 0.999 |
bysl | nat10 | ENSHBUP00000022570 | ENSHBUP00000002504 | Bystin-like. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.999 |
bysl | noc4l | ENSHBUP00000022570 | ENSHBUP00000000153 | Bystin-like. | Nucleolar complex associated 4 homolog. | 0.999 |
bysl | nol6 | ENSHBUP00000022570 | ENSHBUP00000008542 | Bystin-like. | Nucleolar protein 6. | 0.999 |
bysl | rps7 | ENSHBUP00000022570 | ENSHBUP00000003449 | Bystin-like. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.999 |
bysl | rrp9 | ENSHBUP00000022570 | ENSHBUP00000000698 | Bystin-like. | Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. | 0.999 |
bysl | wdr3 | ENSHBUP00000022570 | ENSHBUP00000003066 | Bystin-like. | WD repeat domain 3. | 0.999 |
bysl | wdr36 | ENSHBUP00000022570 | ENSHBUP00000008962 | Bystin-like. | WD repeat domain 36. | 0.999 |
bysl | wdr43 | ENSHBUP00000022570 | ENSHBUP00000010055 | Bystin-like. | WD repeat domain 43. | 0.999 |
page 1 of 6