STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHBUP00000023290Uncharacterized protein. (125 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.963
LOC102294067
H2A histone family, member Y2.
   
 0.945
LOC102298837
H2A histone family, member Y; Belongs to the histone H2A family.
   
 0.945
kdm6b
Lysine (K)-specific demethylase 6B, a.
    
 0.938
LOC102289214
Lysine (K)-specific demethylase 6B, b.
    
 0.938
LOC102291812
Lysine (K)-specific demethylase 6A, like.
    
 0.938
ENSHBUP00000029240
Lysine (K)-specific demethylase 6A.
    
 0.938
LOC102297571
Histone H2A; Belongs to the histone H2A family.
   
 0.937
LOC102298961
Histone H2A; Belongs to the histone H2A family.
   
 0.937
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
 0.935
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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