STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHBUP00000023358IGv domain-containing protein. (165 aa)    
Predicted Functional Partners:
ENSHBUP00000005393
Fibronectin type-III domain-containing protein.
    
 0.887
frem1
Fras1 related extracellular matrix 1a.
   
 
  0.665
LOC102294239
Fras1 related extracellular matrix 1b.
   
 
  0.665
fras1
Fraser extracellular matrix complex subunit 1.
   
 
  0.654
LOC102306937
Zmp:0000000846.
    
 0.638
LOC102308444
Tenascin C.
    
 0.638
ENSHBUP00000019194
Uncharacterized protein.
    
 0.638
LOC102297050
Uncharacterized protein.
    
 0.638
tnn
Tenascin N.
    
 0.638
tnr
Tenascin R (restrictin, janusin).
    
 0.638
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.