STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tankTRAF family member-associated NFKB activator. (335 aa)    
Predicted Functional Partners:
LOC102300281
TANK-binding kinase 1.
   
 0.991
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.989
LOC102299749
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.982
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.982
LOC102312815
Tumor necrosis factor receptor superfamily, member 1a.
    
 
 0.956
LOC102309602
Tumor necrosis factor b (TNF superfamily, member 2).
    
 
 0.951
LOC102296372
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.942
tbkbp1
TBK1 binding protein 1.
     
 0.938
tradd
Tnfrsf1a-associated via death domain.
     
 0.938
azi2
5-azacytidine induced 2.
   
 
 0.923
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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