STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpn12Uncharacterized protein. (671 aa)    
Predicted Functional Partners:
LOC102293092
Tyrosine-protein kinase.
   
 0.843
matk
Tyrosine-protein kinase.
   
 0.843
CSK
Tyrosine-protein kinase.
   
 0.843
SHC4
SHC adaptor protein 4.
    
 0.797
SHC3
SHC adaptor protein 3.
    
 0.797
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.797
LOC102304061
Proline-serine-threonine phosphatase interacting protein 1a.
   
 
 0.732
ENSHBUP00000020612
F-BAR domain-containing protein.
   
 
 0.732
cd247
Uncharacterized protein.
   
 0.710
cd3e
Ig_4 domain-containing protein.
   
 0.675
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.