STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102294551Tetraspanin. (336 aa)    
Predicted Functional Partners:
LOC102309939
ADAM metallopeptidase domain 10b.
    
 0.589
adam10
Uncharacterized protein.
    
 0.589
LOC102289696
Macrophage stimulating 1 receptor a.
    
  0.564
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.564
mst1r
Macrophage stimulating 1 receptor b.
    
  0.564
tspan14
Tetraspanin.
    
0.510
ptgfrn
Uncharacterized protein.
    
 
 0.472
pdgfb
Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family.
    
  0.453
LOC102310023
Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family.
    
  0.453
LOC102306636
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
    
 0.433
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.