STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cspg4Chondroitin sulfate proteoglycan 4. (2303 aa)    
Predicted Functional Partners:
grip1
Glutamate receptor interacting protein 1.
    
 
 0.634
LOC102291557
Decorin; May affect the rate of fibrils formation.
     
 0.608
sdc2
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.551
chst11
Carbohydrate sulfotransferase.
    
 0.551
hspg2
Heparan sulfate proteoglycan 2.
   
 
0.548
csgalnact2
Hexosyltransferase.
     
 0.548
LOC102303775
Glutamate receptor interacting protein 2a.
    
 
 0.545
LOC102289610
Hexosyltransferase.
     
 0.540
chsy1
Hexosyltransferase.
     
 0.540
chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
     
 0.538
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.