STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD5Sterile alpha motif domain containing 5. (170 aa)    
Predicted Functional Partners:
sash1
SAM and SH3 domain containing 1a.
 
    
 0.633
shc2
SHC (Src homology 2 domain containing) transforming protein 2.
    
 0.579
SHC4
SHC adaptor protein 4.
    
 0.579
SHC3
SHC adaptor protein 3.
    
 0.579
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.579
LOC102312860
Eph receptor A6.
    
  0.574
EPHA6
EPH receptor A6.
    
  0.574
epha7
Eph receptor A7.
    
  0.574
epha3
Eph receptor A3.
    
  0.574
epha4
Eph receptor A4, like.
    
  0.574
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.