STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102288832Protein kinase C and casein kinase substrate in neurons 1b. (443 aa)    
Predicted Functional Partners:
LOC102303432
SH3-domain GRB2-like (endophilin) interacting protein 1a.
   
 
 0.541
SGIP1
SH3 domain GRB2 like endophilin interacting protein 1.
   
 
 0.541
LOC102308746
FCH domain only 1.
     
 0.534
fcho2
FCH domain only 2.
     
 0.534
gas7
Growth arrest specific 7.
    
 0.493
LOC102288966
Growth arrest-specific 7a.
    
 0.493
htt
Huntingtin.
    
 
 0.427
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.