Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSHBUP00000003240 | LOC102288967 | ENSHBUP00000003240 | ENSHBUP00000029876 | Si:dkey-185p13.1. | Zgc:153240. | 0.888 |
ENSHBUP00000003240 | chmp2a | ENSHBUP00000003240 | ENSHBUP00000003262 | Si:dkey-185p13.1. | Charged multivesicular body protein 2A. | 0.978 |
ENSHBUP00000003240 | chmp3 | ENSHBUP00000003240 | ENSHBUP00000034612 | Si:dkey-185p13.1. | Charged multivesicular body protein 3. | 0.942 |
ENSHBUP00000003240 | chmp7 | ENSHBUP00000003240 | ENSHBUP00000011863 | Si:dkey-185p13.1. | Charged multivesicular body protein 7. | 0.873 |
ENSHBUP00000003240 | vps25 | ENSHBUP00000003240 | ENSHBUP00000025122 | Si:dkey-185p13.1. | Vacuolar protein sorting 25 homolog. | 0.552 |
ENSHBUP00000003240 | vps28 | ENSHBUP00000003240 | ENSHBUP00000001812 | Si:dkey-185p13.1. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.650 |
ENSHBUP00000003240 | vps36 | ENSHBUP00000003240 | ENSHBUP00000007864 | Si:dkey-185p13.1. | Vacuolar protein sorting 36 homolog. | 0.535 |
LOC102288967 | ENSHBUP00000003240 | ENSHBUP00000029876 | ENSHBUP00000003240 | Zgc:153240. | Si:dkey-185p13.1. | 0.888 |
LOC102288967 | VPS4B | ENSHBUP00000029876 | ENSHBUP00000003195 | Zgc:153240. | Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. | 0.888 |
LOC102288967 | chmp2a | ENSHBUP00000029876 | ENSHBUP00000003262 | Zgc:153240. | Charged multivesicular body protein 2A. | 0.958 |
LOC102288967 | chmp3 | ENSHBUP00000029876 | ENSHBUP00000034612 | Zgc:153240. | Charged multivesicular body protein 3. | 0.956 |
LOC102288967 | chmp7 | ENSHBUP00000029876 | ENSHBUP00000011863 | Zgc:153240. | Charged multivesicular body protein 7. | 0.902 |
LOC102288967 | fam91a1 | ENSHBUP00000029876 | ENSHBUP00000002306 | Zgc:153240. | Family with sequence similarity 91 member A1. | 0.931 |
LOC102288967 | snf8 | ENSHBUP00000029876 | ENSHBUP00000023638 | Zgc:153240. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.969 |
LOC102288967 | vps25 | ENSHBUP00000029876 | ENSHBUP00000025122 | Zgc:153240. | Vacuolar protein sorting 25 homolog. | 0.974 |
LOC102288967 | vps28 | ENSHBUP00000029876 | ENSHBUP00000001812 | Zgc:153240. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.900 |
LOC102288967 | vps36 | ENSHBUP00000029876 | ENSHBUP00000007864 | Zgc:153240. | Vacuolar protein sorting 36 homolog. | 0.968 |
VPS4B | LOC102288967 | ENSHBUP00000003195 | ENSHBUP00000029876 | Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. | Zgc:153240. | 0.888 |
VPS4B | chmp2a | ENSHBUP00000003195 | ENSHBUP00000003262 | Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. | Charged multivesicular body protein 2A. | 0.978 |
VPS4B | chmp3 | ENSHBUP00000003195 | ENSHBUP00000034612 | Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. | Charged multivesicular body protein 3. | 0.942 |
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