STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102295258Dystrobrevin. (605 aa)    
Predicted Functional Partners:
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.875
rsph3
Radial spoke head 3.
    
   0.875
ENSHBUP00000026029
Reverse transcriptase domain-containing protein.
    
   0.833
sntb1
Syntrophin, basic 1.
    
 
 0.646
LOC102308612
Uncharacterized protein.
    
 
 0.646
SNTA1
Syntrophin alpha 1.
    
 
 0.646
sntb2
Syntrophin, beta 2.
    
 
 0.646
sntg2
Syntrophin, gamma 2.
    
 
 0.644
sntg1
Syntrophin, gamma 1.
    
 
 0.644
LOC102305521
Aquaporin 10a; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.626
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.