Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102306219 | LOC102314666 | ENSHBUP00000031863 | ENSHBUP00000031002 | USP domain-containing protein; Belongs to the peptidase C19 family. | Ubiquitin-like domain-containing protein. | 0.820 |
LOC102306219 | pcna | ENSHBUP00000031863 | ENSHBUP00000029821 | USP domain-containing protein; Belongs to the peptidase C19 family. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.733 |
LOC102306219 | rfc4 | ENSHBUP00000031863 | ENSHBUP00000022363 | USP domain-containing protein; Belongs to the peptidase C19 family. | Replication factor C (activator 1) 4. | 0.656 |
LOC102306219 | rfc5 | ENSHBUP00000031863 | ENSHBUP00000009180 | USP domain-containing protein; Belongs to the peptidase C19 family. | Replication factor C (activator 1) 5. | 0.663 |
LOC102306219 | rnf123 | ENSHBUP00000031863 | ENSHBUP00000003543 | USP domain-containing protein; Belongs to the peptidase C19 family. | Ring finger protein 123. | 0.703 |
LOC102306219 | rps27a | ENSHBUP00000031863 | ENSHBUP00000002167 | USP domain-containing protein; Belongs to the peptidase C19 family. | Ribosomal protein S27a. | 0.712 |
LOC102306219 | traf6 | ENSHBUP00000031863 | ENSHBUP00000006634 | USP domain-containing protein; Belongs to the peptidase C19 family. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.724 |
LOC102306219 | uba52 | ENSHBUP00000031863 | ENSHBUP00000026409 | USP domain-containing protein; Belongs to the peptidase C19 family. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.657 |
LOC102306219 | ubb | ENSHBUP00000031863 | ENSHBUP00000019517 | USP domain-containing protein; Belongs to the peptidase C19 family. | Ubiquitin-like domain-containing protein. | 0.657 |
LOC102306219 | usp10 | ENSHBUP00000031863 | ENSHBUP00000011394 | USP domain-containing protein; Belongs to the peptidase C19 family. | Ubiquitin carboxyl-terminal hydrolase. | 0.756 |
LOC102314666 | LOC102306219 | ENSHBUP00000031002 | ENSHBUP00000031863 | Ubiquitin-like domain-containing protein. | USP domain-containing protein; Belongs to the peptidase C19 family. | 0.820 |
LOC102314666 | pcna | ENSHBUP00000031002 | ENSHBUP00000029821 | Ubiquitin-like domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.971 |
LOC102314666 | rfc4 | ENSHBUP00000031002 | ENSHBUP00000022363 | Ubiquitin-like domain-containing protein. | Replication factor C (activator 1) 4. | 0.692 |
LOC102314666 | rfc5 | ENSHBUP00000031002 | ENSHBUP00000009180 | Ubiquitin-like domain-containing protein. | Replication factor C (activator 1) 5. | 0.692 |
LOC102314666 | rps27a | ENSHBUP00000031002 | ENSHBUP00000002167 | Ubiquitin-like domain-containing protein. | Ribosomal protein S27a. | 0.998 |
LOC102314666 | traf6 | ENSHBUP00000031002 | ENSHBUP00000006634 | Ubiquitin-like domain-containing protein. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.979 |
LOC102314666 | uba52 | ENSHBUP00000031002 | ENSHBUP00000026409 | Ubiquitin-like domain-containing protein. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.992 |
LOC102314666 | ubb | ENSHBUP00000031002 | ENSHBUP00000019517 | Ubiquitin-like domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.992 |
LOC102314666 | usp10 | ENSHBUP00000031002 | ENSHBUP00000011394 | Ubiquitin-like domain-containing protein. | Ubiquitin carboxyl-terminal hydrolase. | 0.861 |
pcna | LOC102306219 | ENSHBUP00000029821 | ENSHBUP00000031863 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | USP domain-containing protein; Belongs to the peptidase C19 family. | 0.733 |
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