STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102309762Slingshot protein phosphatase 1b. (666 aa)    
Predicted Functional Partners:
cfl2
Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.
    
 0.933
cfl1
Cofilin 1; Belongs to the actin-binding proteins ADF family.
    
 0.933
dstn
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
    
 0.891
LOC102295195
Si:ch211-203d1.3.
  
  
 
0.844
LOC102289983
Slingshot protein phosphatase 2b.
  
  
 
0.821
ssh2
Slingshot protein phosphatase 2a.
  
  
 
0.819
ssh1
Slingshot protein phosphatase 1a.
  
  
 
0.810
stk38l
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.651
stk38
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.651
LOC102312674
Serine/threonine-protein phosphatase.
    
 0.639
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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