STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vcpkmtValosin containing protein lysine (K) methyltransferase. (222 aa)    
Predicted Functional Partners:
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.973
LOC102292797
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.973
SPATA5
Spermatogenesis associated 5.
   
 0.882
spata5l1
Spermatogenesis associated 5-like 1.
   
 0.882
ubxn6
UBX domain protein 6.
    
 
 0.820
etfb
Electron transfer flavoprotein subunit beta.
     
 0.690
mettl18
Methyltransferase like 18.
   
  
 0.594
eef2kmt
Eukaryotic elongation factor 2 lysine methyltransferase.
   
 
 0.588
ganab
Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.
    
  0.567
hexb
Beta-hexosaminidase.
    
  0.558
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.