STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubxn11UBX domain protein 11. (473 aa)    
Predicted Functional Partners:
ubxn7
UBX domain-containing protein 7.
    
 
 0.964
ENSHBUP00000009075
LisH domain-containing protein.
   
 0.948
ubxn1
UBX domain protein 1.
   
 0.903
plaa
Phospholipase A2-activating protein.
    
 
 0.900
nvl
Nuclear VCP like.
   
 0.895
yod1
YOD1 deubiquitinase.
   
 
 0.892
ubxn6
UBX domain protein 6.
    
 0.892
aspscr1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.883
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.871
LOC102292797
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.871
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.