STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppef1Serine/threonine-protein phosphatase with EF-hands. (754 aa)    
Predicted Functional Partners:
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 0.831
anapc1
Anaphase promoting complex subunit 1.
    
 0.789
LOC102290507
Uncharacterized protein.
    
 0.779
ppp4r2
Protein phosphatase 4, regulatory subunit 2b.
    
 0.779
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.772
ppp4r3a
SMEK homolog 1, suppressor of mek1 (Dictyostelium).
   
 0.758
ppp4r3b
Protein phosphatase 4, regulatory subunit 3B.
   
 0.758
ppp4r4
Protein phosphatase 4, regulatory subunit 4.
   
 0.756
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
   
 0.754
LOC102308227
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.750
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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