Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
asb7Ankyrin repeat and SOCS box containing 7. (328 aa)    
Predicted Functional Partners:
LOC113036014
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.961
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.961
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.953
rpap3
RNA polymerase II associated protein 3.
  
 0.947
rnf7
Ring finger protein 7.
    
 0.934
wdr92
WD repeat domain 92.
    
  0.914
LOC113019345
Ubiquitin-like domain-containing protein.
    
 0.875
LOC113020323
Elongin B.
    
 0.875
hif1an
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
   0.839
pih1d1
PIH1 domain containing 1.
    
   0.826
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.