STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113034610Carbonyl reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)    
Predicted Functional Partners:
ptges3
Prostaglandin E synthase 3a (cytosolic).
   
 0.855
spr
Sepiapterin reductase b.
     
 0.842
dhfr
Dihydrofolate reductase.
  
 
 0.836
LOC113027086
Zgc:153031.
  
 
 0.829
ENSACLP00000041285
Prostaglandin E synthase.
     
 0.829
ENSACLP00000000787
Prostaglandin E synthase 2-like; Belongs to the GST superfamily.
     
 0.825
LOC113009224
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2.
  
 
 0.823
LOC113026007
Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family.
  
 
  0.820
LOC113035121
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.817
LOC113031405
Cytochrome b5 reductase 4.
  
 0.763
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.