Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
c23h1orf112Si:dkey-97o5.1. (922 aa)    
Predicted Functional Partners:
fignl1
Fidgetin-like 1; Belongs to the AAA ATPase family.
   
 0.888
FIGNL2
Fidgetin like 2.
   
 0.855
ENSACLP00000005459
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.855
fign
Fidgetin; Belongs to the AAA ATPase family.
   
 0.855
ENSACLP00000029011
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.855
ENSACLP00000030020
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.855
ENSACLP00000036397
Vps4_C domain-containing protein.
   
 0.855
ENSACLP00000007406
Exonuclease 1.
   
 
 0.786
rad51
DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]
   
 0.751
ENSACLP00000000444
Uncharacterized protein.
   
 
 0.740
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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