Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ttc13Tetratricopeptide repeat domain 13. (826 aa)    
Predicted Functional Partners:
tpgs1
Uncharacterized protein.
      
 0.903
asmtl
Acetylserotonin O-methyltransferase-like.
    
  0.805
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.785
ak9
Adenylate kinase 9.
   
 0.772
ENSACLP00000031748
CDC42 effector protein (Rho GTPase binding) 5.
      
 0.717
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.675
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.673
LOC113028537
BTB (POZ) domain containing 17a.
    
 0.658
LOC113020679
BTB (POZ) domain containing 17b.
    
 0.658
bbs9
Bardet-Biedl syndrome 9.
    
 0.630
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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