STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000000091Ectonucleotide pyrophosphatase/phosphodiesterase 7, tandem duplicate 2. (462 aa)    
Predicted Functional Partners:
smpd2
Sphingomyelin phosphodiesterase 2b, neutral membrane (neutral sphingomyelinase).
     
 0.857
smpd1
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
     
 0.857
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.855
smpd4
Sphingomyelin phosphodiesterase 4.
     
 0.854
ENSACLP00000025365
Neutral ceramidase.
     
 0.853
coasy
CoA synthase.
    
  0.847
pla2g4a
Phospholipase A2.
   
 
 0.846
ak9
Adenylate kinase 9.
   
 
  0.844
LOC113032538
Sphingomyelin phosphodiesterase 5.
     
 0.843
ENSACLP00000017287
Ceramide synthase 6.
    
 0.841
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.