Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
LOC113027737Zgc:171971. (386 aa)    
Predicted Functional Partners:
polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.992
LOC113033777
RNA polymerase I and III subunit D.
   
 0.991
polr2h
Info polymerase (RNA) II (DNA directed) polypeptide H.
   
 0.991
polr3e
Polymerase (RNA) III (DNA directed) polypeptide E.
   
 0.990
polr3f
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
   
 0.989
polr1c
RNA polymerase I and III subunit C.
   
 0.987
ENSACLP00000009241
RPOL9 domain-containing protein.
   
 0.986
polr3h
Polymerase (RNA) III (DNA directed) polypeptide H.
   
 0.986
POLR2E
RNA polymerase II subunit E.
   
 0.983
crcp
Calcitonin gene-related peptide-receptor component protein.
   
 0.983
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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