STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113012711Uncharacterized protein. (813 aa)    
Predicted Functional Partners:
LOC113025693
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.944
xbp1
X-box binding protein 1.
    
 0.936
LOC113033094
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.927
LOC113025455
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.927
LOC113031861
Si:ch211-1i11.3.
    
 0.914
map3k5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.914
LOC113025679
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.894
LOC113025681
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 0.894
ENSACLP00000039549
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 0.894
ENSACLP00000014386
SEC63 homolog, protein translocation regulator.
    
 
 0.815
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (46%) [HD]