Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001021Family with sequence similarity 184 member A. (1109 aa)    
Predicted Functional Partners:
LOC113030206
Malate synthase-like.
   
 
 0.863
ENSACLP00000015298
NBR1 autophagy cargo receptor b.
    
 0.747
LOC113028111
NBR1 autophagy cargo receptor a.
    
 0.747
ENSACLP00000009777
WDFY family member 4.
    
  0.694
ENSACLP00000010328
Uncharacterized protein.
    
  0.694
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.634
ENSACLP00000017156
WD repeat domain 90.
   
 0.613
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.601
traf7
TNF receptor-associated factor 7.
    
  0.543
ENSACLP00000028847
Malate dehydrogenase.
    
 0.540
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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