STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001021Family with sequence similarity 184 member A. (1109 aa)    
Predicted Functional Partners:
LOC113030206
Malate synthase-like.
   
 
 0.890
espl1
Extra spindle pole bodies like 1, separase.
    
 0.645
ENSACLP00000036302
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.543
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.532
LOC113026688
P53-induced death domain protein 1.
    
  0.525
ENSACLP00000026460
Cytoskeleton associated protein 5.
    
 
 0.525
ENSACLP00000028847
Malate dehydrogenase.
     
 0.520
PLK1
Serine/threonine-protein kinase PLK.
    
 0.515
plk2
Serine/threonine-protein kinase PLK.
    
 0.515
ENSACLP00000032141
Polo-like kinase 4 (Drosophila).
    
 0.515
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.