Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zfand1Zinc finger, AN1-type domain 1. (332 aa)    
Predicted Functional Partners:
nsfl1c
NSFL1 (p97) cofactor (p47).
    
 
 0.879
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
   0.833
FAAP100
FA core complex associated protein 100.
    
 
 0.819
nploc4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.819
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
   0.815
psmc6
Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.
   
   0.812
psmd7
Proteasome 26S subunit, non-ATPase 7.
   
 
 0.812
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
   
   0.811
psmd3
Proteasome 26S subunit, non-ATPase 3.
   
   0.806
psmc2
Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.
   
   0.801
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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