Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACLP00000001031ADP-ribosylation factor-like 13A. (394 aa)    
Predicted Functional Partners:
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.879
ENSACLP00000036802
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.867
ENSACLP00000036839
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.867
stx16
Syntaxin 16; Belongs to the syntaxin family.
    
 0.863
ift81
Intraflagellar transport 81 homolog.
    
 
 0.818
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 
 0.812
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 
 0.769
ENSACLP00000038605
MON2 homolog, regulator of endosome-to-Golgi trafficking.
    
 
 0.698
ENSACLP00000026146
Intraflagellar transport 88 homolog.
    
 0.692
rab34
RAB34, member RAS oncogene family a.
    
 0.689
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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