STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xkrxXK-related protein. (491 aa)    
Predicted Functional Partners:
LOC113022221
Cytochrome b-245, alpha polypeptide.
   
 0.968
ncf1
Neutrophil cytosolic factor 1.
   
 0.961
ncf4
Neutrophil cytosolic factor 4.
   
 0.952
ENSACLP00000013534
Dual oxidase 2.
   
 0.945
ncf2
Neutrophil cytosolic factor 2.
   
 0.898
ENSACLP00000026861
NADPH oxidase activator 1.
   
 0.898
nox4
FAD-binding FR-type domain-containing protein.
    
 0.890
mmp9
Matrix metallopeptidase 9.
   
 
 0.860
nampt
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
     
  0.841
LOC113028221
Protein kinase domain-containing protein.
   
 0.804
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.