STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xkrxXK-related protein. (491 aa)    
Predicted Functional Partners:
LOC113022221
Cytochrome b-245, alpha polypeptide.
   
 0.943
ENSACLP00000013534
Dual oxidase 2.
   
 0.890
ncf1
Neutrophil cytosolic factor 1.
   
 0.874
nox4
FAD-binding FR-type domain-containing protein.
 
  
 0.866
ncf4
Neutrophil cytosolic factor 4.
   
 0.854
sh3rf3
SH3 domain containing ring finger 3.
   
 0.828
mmp9
Matrix metallopeptidase 9.
   
 
 0.820
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.757
vcam1
Uncharacterized protein.
   
 0.754
ncf2
Neutrophil cytosolic factor 2.
   
 0.736
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.