STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nox1NADPH oxidase 1. (566 aa)    
Predicted Functional Partners:
ncf1
Neutrophil cytosolic factor 1.
   
 0.989
ncf4
Neutrophil cytosolic factor 4.
   
 0.984
LOC113022221
Cytochrome b-245, alpha polypeptide.
   
 0.978
ncf2
Neutrophil cytosolic factor 2.
   
 0.949
nox4
FAD-binding FR-type domain-containing protein.
  
 
0.949
ENSACLP00000013534
Dual oxidase 2.
   
 0.945
ENSACLP00000026861
NADPH oxidase activator 1.
   
 0.939
mmp9
Matrix metallopeptidase 9.
   
 
 0.860
nampt
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
     
  0.841
LOC113028221
Protein kinase domain-containing protein.
   
 0.804
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.