Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113009151Doublesex and mab-3 related transcription factor 2b. (443 aa)    
Predicted Functional Partners:
med29
Mediator complex subunit 29.
    
 
 0.797
ENSACLP00000017518
WD repeat domain 24.
    
 0.740
kptn
Kaptin (actin binding protein).
    
 0.739
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.731
hoxc9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
    
 
 0.714
ENSACLP00000034458
Uncharacterized protein.
   
 0.714
wdr59
WD repeat domain 59.
    
 0.706
LOC113006570
Uncharacterized protein.
      
 0.705
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.704
fbxl6
F-box domain-containing protein.
      
 0.693
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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