Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
arhgap23Rho GTPase activating protein 23a. (1827 aa)    
Predicted Functional Partners:
ENSACLP00000005089
Uncharacterized protein.
    
 
 0.884
ccdc51
Coiled-coil domain containing 51.
      
 0.654
ccdc85c
Coiled-coil domain containing 85C, b.
    
 
 0.629
ENSACLP00000003287
Synaptojanin 1.
     
  0.557
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
  0.557
inpp5f
Inositol polyphosphate-5-phosphatase F.
     
  0.557
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 
 0.553
rnd1
Rho family GTPase 1b.
    
 0.551
rnd3
Rho family GTPase 3a.
    
 0.551
LOC113025776
Ras homolog family member F.
    
 0.548
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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