ENSACLP00000001062 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000001062

Bloodthirsty-related gene family, member 12. (541 aa)

Predicted Functional Partners:

ikbke

0.556

LOC113019144

0.543

LOC113008434

0.512

ENSACLP00000006259

0.502

ENSACLP00000006332

0.492

ENSACLP00000001084

0.486

ENSACLP00000006282

0.484

ENSACLP00000006297

0.483

ENSACLP00000015005

0.480

LOC113025014

0.478

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000001062	ENSACLP00000001084	ENSACLP00000001062	ENSACLP00000001084	Bloodthirsty-related gene family, member 12.	Uncharacterized protein.	0.486
ENSACLP00000001062	ENSACLP00000006259	ENSACLP00000001062	ENSACLP00000006259	Bloodthirsty-related gene family, member 12.	Uncharacterized protein.	0.502
ENSACLP00000001062	ENSACLP00000006282	ENSACLP00000001062	ENSACLP00000006282	Bloodthirsty-related gene family, member 12.	Uncharacterized protein.	0.484
ENSACLP00000001062	ENSACLP00000006297	ENSACLP00000001062	ENSACLP00000006297	Bloodthirsty-related gene family, member 12.	Uncharacterized protein.	0.483
ENSACLP00000001062	ENSACLP00000006332	ENSACLP00000001062	ENSACLP00000006332	Bloodthirsty-related gene family, member 12.	Uncharacterized protein.	0.492
ENSACLP00000001062	ENSACLP00000015005	ENSACLP00000001062	ENSACLP00000015005	Bloodthirsty-related gene family, member 12.	Uncharacterized protein.	0.480
ENSACLP00000001062	LOC113008434	ENSACLP00000001062	ENSACLP00000006328	Bloodthirsty-related gene family, member 12.	Zgc:113337.	0.512
ENSACLP00000001062	LOC113019144	ENSACLP00000001062	ENSACLP00000001077	Bloodthirsty-related gene family, member 12.	Zinc finger protein 219.	0.543
ENSACLP00000001062	LOC113025014	ENSACLP00000001062	ENSACLP00000033102	Bloodthirsty-related gene family, member 12.	Potassium inwardly-rectifying channel, subfamily J, member 11, like.	0.478
ENSACLP00000001062	ikbke	ENSACLP00000001062	ENSACLP00000008194	Bloodthirsty-related gene family, member 12.	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	0.556
ENSACLP00000001084	ENSACLP00000001062	ENSACLP00000001084	ENSACLP00000001062	Uncharacterized protein.	Bloodthirsty-related gene family, member 12.	0.486
ENSACLP00000006259	ENSACLP00000001062	ENSACLP00000006259	ENSACLP00000001062	Uncharacterized protein.	Bloodthirsty-related gene family, member 12.	0.502
ENSACLP00000006259	ENSACLP00000015005	ENSACLP00000006259	ENSACLP00000015005	Uncharacterized protein.	Uncharacterized protein.	0.445
ENSACLP00000006259	LOC113008434	ENSACLP00000006259	ENSACLP00000006328	Uncharacterized protein.	Zgc:113337.	0.510
ENSACLP00000006259	LOC113025014	ENSACLP00000006259	ENSACLP00000033102	Uncharacterized protein.	Potassium inwardly-rectifying channel, subfamily J, member 11, like.	0.498
ENSACLP00000006282	ENSACLP00000001062	ENSACLP00000006282	ENSACLP00000001062	Uncharacterized protein.	Bloodthirsty-related gene family, member 12.	0.484
ENSACLP00000006282	ENSACLP00000015005	ENSACLP00000006282	ENSACLP00000015005	Uncharacterized protein.	Uncharacterized protein.	0.468
ENSACLP00000006282	LOC113008434	ENSACLP00000006282	ENSACLP00000006328	Uncharacterized protein.	Zgc:113337.	0.497
ENSACLP00000006282	LOC113025014	ENSACLP00000006282	ENSACLP00000033102	Uncharacterized protein.	Potassium inwardly-rectifying channel, subfamily J, member 11, like.	0.485
ENSACLP00000006297	ENSACLP00000001062	ENSACLP00000006297	ENSACLP00000001062	Uncharacterized protein.	Bloodthirsty-related gene family, member 12.	0.483