Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACLP00000001071Amino acid transporter. (537 aa)    
Predicted Functional Partners:
LOC113035203
Proteolipid protein 1a.
   
 
 0.804
LOC113030477
Proteolipid protein 1b.
   
 
 0.804
LOC113016575
Amino acid transporter.
   
 
  0.800
ENSACLP00000027811
Solute carrier family 1 member 3a.
   
 
  0.800
LOC113026311
Amino acid transporter.
   
 
  0.800
LOC113006850
Amino acid transporter.
     
  0.739
LOC113012020
Amino acid transporter.
     
  0.739
LOC113010584
Amino acid transporter.
     
  0.739
LOC113016695
Amino acid transporter.
     
  0.739
LOC113034277
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
    
 0.735
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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