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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001071Amino acid transporter. (537 aa)    
Predicted Functional Partners:
slc1a1
Amino acid transporter.
  
  
0.740
ENSACLP00000001581
Solute carrier family 13 member 1.
    
 0.580
ENSACLP00000001643
Uncharacterized protein.
    
 0.580
ENSACLP00000004993
Solute carrier family 13 member 4.
    
 0.580
ENSACLP00000009677
Solute carrier family 13 member 5b.
    
 0.580
slc13a2
Solute carrier family 13 member 2.
    
 0.580
LOC113030499
Solute carrier family 13 member 5a.
    
 0.580
ENSACLP00000028811
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
  
 
 0.564
LOC113010584
Amino acid transporter.
  
 
 
0.563
LOC113016695
Amino acid transporter.
  
 
 
0.563
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.