Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113027755Rac family small GTPase 3b. (192 aa)    
Predicted Functional Partners:
LOC113022221
Cytochrome b-245, alpha polypeptide.
   
 0.923
ncf1
Neutrophil cytosolic factor 1.
   
 0.919
LOC113022989
Cell division cycle 42.
   
 0.916
PAK2
Non-specific serine/threonine protein kinase.
    
 0.910
pak2
Non-specific serine/threonine protein kinase.
    
 0.910
ENSACLP00000030278
BAI1 associated protein 2.
    
 0.909
LOC113020650
BAI1-associated protein 2a.
    
 0.909
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
   
 0.901
nckap1l
NCK associated protein 1 like.
   
 0.900
arhgef6
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6.
   
 0.899
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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