STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pacsin1Protein kinase C and casein kinase substrate in neurons 1b. (443 aa)    
Predicted Functional Partners:
ENSACLP00000021832
Huntingtin.
    
 
 0.665
rai14
Retinoic acid induced 14.
    
 
 0.626
LOC113025140
Si:dkey-30c15.10.
    
   0.555
anln
Anillin, actin binding protein.
    
   0.555
LOC113008847
Uncharacterized protein.
    
 
 0.521
LOC113026240
WASP like actin nucleation promoting factor a.
    
 
 0.521
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.485
ENSACLP00000014038
SH3-domain GRB2-like (endophilin) interacting protein 1a.
     
 0.472
ENSACLP00000015733
FCH domain only 1.
     
 0.472
ENSACLP00000018490
SH3-domain GRB2-like (endophilin) interacting protein 1b.
     
 0.472
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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