STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pacsin1Protein kinase C and casein kinase substrate in neurons 1b. (443 aa)    
Predicted Functional Partners:
ENSACLP00000014038
SH3-domain GRB2-like (endophilin) interacting protein 1a.
   
 
 0.535
ENSACLP00000018490
SH3-domain GRB2-like (endophilin) interacting protein 1b.
   
 
 0.535
ENSACLP00000015733
FCH domain only 1.
     
 0.526
fcho2
FCH domain only 2.
     
 0.526
ENSACLP00000030550
Growth arrest-specific 7a.
    
 0.503
gas7
Growth arrest specific 7.
    
 0.503
ENSACLP00000021832
Huntingtin.
    
 
 0.426
ENSACLP00000023606
Ig-like domain-containing protein.
      
 0.416
LOC113008847
Uncharacterized protein.
    
 
 0.401
LOC113026240
WASP like actin nucleation promoting factor a.
    
 
 0.401
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.